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Phylogenetic network
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#	Item
11	Reconstructing Reticulate Evolution in Species – Theory and Practice Luay Nakhleh Tandy Warnow Add to Reading List Source URL: www.cs.rice.edu Language: English - Date: 2004-07-27 17:52:12 Knowledge representation Binary trees Phylogenetic network Phylogenetics Tree Schedule Reticulation Bridge Skew heap Link/cut tree
12	JOURNAL OF COMPUTATIONAL BIOLOGY Volume 12, Number 6, 2005 © Mary Ann Liebert, Inc. Pp. 796–811 Reconstructing Reticulate Evolution in Species— Add to Reading List Source URL: www.cs.rice.edu Language: English - Date: 2008-02-12 09:02:55 Phylogenetic network Phylogenetics Reticulation Tree Schedule Reticulate evolution Skew heap
13	reconciling trees Stefanie Hartmann postdoc, Todd Vision’s lab University of North Carolina 1 Add to Reading List Source URL: informatics.nescent.org Language: English - Date: 2016-04-13 13:52:15 Phylogenetics Phylogenetic tree Phylogenomics Bioinformatics Evolution Gene family Gene duplication Tree of life PhyloXML Phylogenetic network
14	458 IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOL. 4, Add to Reading List Source URL: community.dur.ac.uk Language: English - Date: 2007-10-30 08:51:01 Knowledge representation Phylogenetics Agreement forest Tree Phylogenetic network
15	PERFECT PHYLOGENETIC NETWORKS: A NEW METHODOLOGY FOR RECONSTRUCTING THE EVOLUTIONARY HISTORY OF NATURAL LANGUAGES LUAY NAKHLEH DON RINGE Add to Reading List Source URL: www.cs.rice.edu Language: English - Date: 2005-07-11 22:58:50 Historical linguistics Phylogenetics Language comparison Computational phylogenetics Tree model Tandy Warnow Perfect phylogeny Indo-European languages Phylogenetic tree Genetic relationship Comparative method Phylogenetic network
16	BIOINFORMATICS APPLICATIONS NOTE Vol. 21 no, pages 2909–2911 doi:bioinformatics/bti425 Sequence analysis Add to Reading List Source URL: www-stat.wharton.upenn.edu Language: English - Date: 2006-07-24 16:11:25 Bioinformatics Biology Multiple sequence alignment DNA binding site Sequence motif Sequence alignment Gene regulatory network Consensus sequence Sequence analysis ST motif MEME suite Phylogenetic footprinting
17	Genome Informatics 13: 353–Extraction of Modules from the Metabolic Pathways with Phylogenetic Profile Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-19 23:03:36 Systems biology Biological databases KEGG Modularity Bioinformatics Module Metabolism STRING Homology Metabolic network
18	Comparative Methods for the Analysis of Gene-Expression Evolution: An Example Using Yeast Functional Genomic Data Todd H. Oakley,* 1 Zhenglong Gu,* Ehab Abouheif, 3 Nipam H. Patel, 2 and Wen-Hsiung Li* Ecology and Ev Add to Reading List Source URL: biology.mcgill.ca Language: English* - Date: 2014-06-10 10:16:46 Biology Gene expression Molecular genetics Molecular evolution Mutation Phylogenetics Ridge Phylogenetic comparative methods Gene regulatory network Evolution by gene duplication Bioinformatics Gene duplication
19	Microsoft Word - 21-Hatanaka.doc Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2008-12-11 03:38:26 Biology Gene expression Biochemistry E2F TRANSFAC Promoter Cis-regulatory element Transcriptional regulation Regulatory sequence Transcription factor Gene regulatory network Phylogenetic footprinting
20	Genome Informatics 15(1): 249–Extraction of Phylogenetic Network Modules from Prokayrote Metabolic Pathways Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2004-05-17 23:52:01 Biology Systems biology Chemistry Biochemistry Metabolism Bioinformatics Biological databases KEGG Metabolic pathway Enzyme Gene regulatory network Interactome

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